haussmeister
0.2
Site
haussmeister
Page
Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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L
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M
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N
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P
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R
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S
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T
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W
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X
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Y
A
activity_level() (in module pipeline2p)
area2p (pipeline2p.ThorExperiment attribute)
,
[1]
B
basefile (haussio.HaussIO attribute)
,
[1]
C
ch2p (pipeline2p.ThorExperiment attribute)
,
[1]
contiguous_stationary() (in module pipeline2p)
convolve() (in module spectral)
D
decode (module)
decodeMLNonparam() (in module decode)
decodeMLPoisson() (in module decode)
detrend (pipeline2p.ThorExperiment attribute)
,
[1]
DoricHaussIO (class in haussio)
E
eta() (in module pipeline2p)
extract_rois() (in module pipeline2p)
extract_signals() (in module pipeline2p)
F
ffmpeg_fn (haussio.HaussIO attribute)
,
[1]
fgaussColqu() (in module spectral)
filenames (haussio.HaussIO attribute)
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[1]
filetrunk (haussio.HaussIO attribute)
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[1]
fn2p (pipeline2p.ThorExperiment attribute)
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[1]
fnsync (pipeline2p.ThorExperiment attribute)
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[1]
fnvr (pipeline2p.ThorExperiment attribute)
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[1]
format_index() (haussio.HaussIO method)
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[1]
fps (haussio.HaussIO attribute)
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[1]
,
[2]
,
[3]
G
gaussian_filter() (in module spectral)
get_normbright() (in module movies)
get_normframe() (haussio.HaussIO method)
,
[1]
get_rois_cnmf() (in module pipeline2p)
get_rois_ij() (in module pipeline2p)
get_rois_sima() (in module pipeline2p)
get_rois_thunder() (in module pipeline2p)
get_scale_bar() (haussio.HaussIO method)
,
[1]
get_vr_maps() (in module pipeline2p)
H
HaussIO (class in haussio)
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[1]
haussio (module)
highpass() (in module spectral)
html_movie() (in module movies)
I
ignore_sync_errors (pipeline2p.ThorExperiment attribute)
,
[1]
infer_spikes() (in module pipeline2p)
L
lowpass() (in module spectral)
M
make_movie() (haussio.HaussIO method)
,
[1]
(in module movies)
make_movie_extern() (haussio.HaussIO method)
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[1]
maxtime (haussio.HaussIO attribute)
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[1]
(pipeline2p.ThorExperiment attribute)
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[1]
mc_method (pipeline2p.ThorExperiment attribute)
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[1]
movie_fn (haussio.HaussIO attribute)
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[1]
MovieHaussIO (class in haussio)
movies (module)
N
norm() (in module pipeline2p)
nrois_init (pipeline2p.ThorExperiment attribute)
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[1]
numpy_movie() (in module movies)
P
pipeline2p (module)
plot_rois() (in module pipeline2p)
plot_scale_bar() (haussio.HaussIO method)
,
[1]
PrairieHaussIO (class in haussio)
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[1]
process_data() (in module pipeline2p)
R
roi_subset (pipeline2p.ThorExperiment attribute)
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[1]
roi_translate (pipeline2p.ThorExperiment attribute)
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[1]
root_path (pipeline2p.ThorExperiment attribute)
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[1]
S
save_scale_bar() (haussio.HaussIO method)
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[1]
(in module movies)
scale_png (haussio.HaussIO attribute)
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[1]
seg_method (pipeline2p.ThorExperiment attribute)
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[1]
SI4HaussIO (class in haussio)
sima_dir (haussio.HaussIO attribute)
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[1]
sima_export_frames() (in module haussio)
spectral (module)
T
thor_extract_roi() (in module pipeline2p)
thor_preprocess() (in module pipeline2p)
ThorExperiment (class in pipeline2p)
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[1]
ThorHaussIO (class in haussio)
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[1]
timing (haussio.HaussIO attribute)
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[1]
to_haussio() (pipeline2p.ThorExperiment method)
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[1]
to_sima() (pipeline2p.ThorExperiment method)
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[1]
tosima() (haussio.HaussIO method)
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[1]
W
width_idx (haussio.HaussIO attribute)
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[1]
X
xcorr() (in module pipeline2p)
xpx (haussio.HaussIO attribute)
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[1]
xsize (haussio.HaussIO attribute)
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[1]
Y
ypx (haussio.HaussIO attribute)
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[1]
ysize (haussio.HaussIO attribute)
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[1]