References

Last update:

02 April, 2026

Stimfit has been used for data analysis in the following publications. The list was put together by a script that automatically finds new publications. It may contain errors. If you miss a reference to your publication, please let us know here.

2026

• Engel D, Nguyen L (2026) Protocol for whole-cell patch-clamp recording and post hoc identification of hippocampal CA2 pyramidal neurons in adult mouse brain slices. STAR Protocols 7(2):104470.

• Meftah S, Wilson MA, Elliott J, et al. (2026) GABAB receptor signaling in CA1 pyramidal cells is not regulated by aging in the APP/PS1 mouse model of amyloid pathology. eNeuro 13(2):ENEURO.0099-23.2025.

• Aaltonen A, Tamaki A, Peris Ramon A, et al. (2026) Postnatal reduction of eIF4E overexpression in D1-SPNs ameliorates KCNQ channel dysfunction, hyperexcitability and ASD-like behaviours. Cell Mol Life Sci 83:121.

• Gutmann N, Häussler U, Mersi A, et al. (2026) Increased dendritic inhibition of dentate gyrus granule cells in a mouse model of Down syndrome. Front Cell Neurosci 20:1714586.

• Aaltonen A, Razquin Lizarraga J, Oyrer J, et al. (2026) Altered striatal long-term potentiation in the eIF4E-TG ASD mouse model. bioRxiv [preprint].

• García-Baena I, Sanz-Rubio D, Belmonte C, et al. (2026) A novel methodology to characterize beat-to-beat alternations in whole-cell calcium currents. PLoS One 21(1):e0339890.

• Guinet A, Behr J, Vida I, Grosser S (2026) Spatial Organization of Morpho‐Electric Subtypes of Pyramidal Neuron in the Subiculum. Hippocampus.

• Wilson MA, Sumera A, Berk E, Booker SA (2026) Elevated somatostatin interneuron long-term potentiation minimally regulates temporoammonic plasticity in a mouse model of Fragile X Syndrome. Frontiers in Pharmacology.

2025

• Wilson MA, Sumera A, Taylor LW, et al. (2025) Phylogenetic divergence of GABAB receptor signaling in neocortical networks over adult life. Nat Comm 16:59262.

• Le Bail R, Lakaye B, Espuny-Camacho I, et al. (2025) Ccp1 depletion disrupts network integration of hippocampal parvalbumin interneurons. iScience 28(8):113215.

• Wang FC, Bouquiaux O, Lievens I, et al. (2025) Clinical, electromyographic, and biophysical characterization of the rare Nav1.4 channel mutation SCN4A L1436P. Front Physiol 16:1617672.

• Loureiro R, Booker SA, Kulik A, et al. (2025) GABAB receptors negatively modulate excitatory plasticity at the mossy fiber synapse onto parvalbumin-expressing basket and axo-axonic cells in the dentate gyrus. Front Synaptic Neurosci 17:1656759.

• Potts Y, Daykin H, Van Den Bossche M, et al. (2025) Characterization of locus coeruleus neuronal properties with aging in two mouse models of tauopathy. J Alzheimers Dis 105(1):325-342.

• Quadir SG, Zaidi S, Cone MG, et al. (2025) Alcohol withdrawal alters the inhibitory landscape of the prelimbic cortex in an interneuron- and sex-specific manner. Addict Neurosci 8:100237.

• Aaltonen A, Tamaki A, Peris Ramon A, et al. (2025) Postnatal reduction of eIF4E overexpression in D1-SPNs ameliorates KCNQ dysfunction, hyperexcitability and ASD-like behaviours. bioRxiv [preprint].

• Wang FC, Bouquiaux O, Lievens I, et al. (2025) Analysis of a rare pathogenic variant of the SCN4A gene (c.4307T>C, L1436P): from clinic to patch-clamp. Research Square [preprint].

• Katsanevaki D, Dupuy N, Booker SA, et al. (2025) Noradrenergic-dependent restoration of visual discrimination in a mouse model of SYNGAP1-related disorder. bioRxiv [preprint].

• Knops MJ, Meftah S, Wilson MA, Taylor LW, et al. (2025) FMRP regulates adult human cortical neuron excitability via cyclic-AMP signalling. bioRxiv [preprint].

• Lee B, Xing X, Hammes EA, Zeng Z, et al. (2025) Signaling by intracellular β2-adrenergic receptors regulates AMPA receptor trafficking and synaptic plasticity. Cell Rep.

• Li X, Winters ND, Pandey S, Lankford CK, et al. (2025) Homeostatic scaling of dynorphin signaling by a non-canonical opioid receptor. Nat Comm.

• Yasmin F, Marwick K, Hunter D, Nawaz S, et al. (2025) Absence of GluN2A in hippocampal CA1 neurons leads to altered dendritic structure and reduced frequency of miniature excitatory synaptic events. Brain Communications.

• O’Keeffe M, Booker SA, Walsh D, Li M, et al. (2025) Typical development of synaptic and neuronal properties can proceed without microglia in the cortex and thalamus. Nature Neuroscience.

2024

• Watson JF, Vargas-Barroso V, Morse-Mora RJ, et al. (2024) Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory. Cell 187(24):6848-6864.e24.

• Chen J, Kaufmann WA, Chen C, et al. (2024) Developmental transformation of Ca2+ channel-vesicle nanotopography at a central GABAergic synapse. Neuron 112(3):571-586.e8.

• Watson TC, Booker SA (2024) Somatostatin interneurons recruit pre- and postsynaptic GABAB receptors in the adult mouse dentate gyrus. eNeuro 11(6):ENEURO.0115-24.2024.

• Degro CE, Vida I, Booker SA (2024) Postsynaptic GABAB receptor-mediated currents in diverse dentate gyrus interneuron types. Hippocampus 34(10):1037-1053.

• Carbonell-Roig J, Aaltonen A, Wilson K, et al. (2024) Dysregulated acetylcholine-mediated dopamine neurotransmission in the eIF4E Tg mouse model of autism spectrum disorders. Cell Rep 43(12):114997.

• Katsanevaki D, Till SM, Buller-Peralta I, et al. (2024) Key roles of C2/GAP domains in SYNGAP1-related pathophysiology. Cell Rep 43(9):114733.

• Simões de Oliveira L, O’Leary H, Nawaz S, et al. (2024) Enhanced hippocampal LTP but normal NMDA receptor and AMPA receptor function in a rat model of CDKL5 deficiency disorder. Mol Autism 15:45.

• Mehrotra D, Levenstein D, Duszkiewicz AJ, et al. (2024) Hyperpolarization-activated currents drive neuronal activation sequences in sleep. Curr Biol 34(13):2930-2945.e6.

• Zimmermann D, Kress M, Zeidler M (2024) Biophysical essentials - A full stack open-source software framework for conserved and advanced analysis of patch-clamp recordings. Comput Methods Programs Biomed 250:108328.

• Guarina L, Le J, Griffith TN, et al. (2024) SanPy: Software for the analysis and visualization of whole-cell current-clamp recordings. Biophys J 123(8):1259-1272.

• Trovò L, Kouvaros S, Schwenk J, et al. (2024) Synaptotagmin-11 facilitates assembly of a presynaptic signaling complex in post-Golgi cargo vesicles. EMBO Rep 25(6):e57893.

• Klein A, Klug K, Breyer M, et al. (2024) Genetic variants of unknown significance in alpha-galactosidase A: cellular delineation from Fabry disease. J Inherit Metab Dis 47(5):945-960.

• Lawal OO, Ulloa Severino FP, Wang S, et al. (2024) Astrocytic thrombospondins 1 and 2 are required for cortical synapse development controlling instrumental performance. bioRxiv [preprint].

• Watson JF, Vargas-Barroso V, Jónás P (2024) Cell-specific wiring routes information flow through hippocampal CA3. bioRxiv [preprint].

• Wilson MA, Taylor LW, Meftah S, et al. (2024) Phylogenetic divergence of GABA B receptor signalling in neocortical networks over adult life. bioRxiv [preprint].

• Jehasse K, Jouhanneau JS, Wetz S, Schwedt A, et al. (2024) Immediate reuse of patch-clamp pipettes after ultrasonic cleaning. Scientific Reports.

• Irala D, Wang S, Sakers K, Nagendren L, et al. (2024) Astrocyte-secreted neurocan controls inhibitory synapse formation and function. Neuron.

• Winchester G, Steele OG, Liu S, Chagas AM, et al. (2024) Reproducible supervised learning-assisted classification of spontaneous synaptic waveforms with Eventer. Front Neuroinform.

• Ye S, Song S, Liu X, Luo Y, et al. (2024) A small‐molecule screen identifies novel aging modulators by targeting 5‐HT/DA signaling pathway. Aging Cell.

• Chen C, Niehaus JK, Dinç F, Huang KL, et al. (2024) Neural circuit basis of placebo pain relief. Nature.

• Kim O, Okamoto Y, Kaufmann WA, Brose N, et al. (2024) Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons. PLoS Biology.

2023

• Grigoryan GA, Harada H, Knobloch‐Bollmann HS, Kilias A, et al. (2023) Synaptic plasticity at the dentate gyrus granule cell to somatostatin-expressing interneuron synapses supports object location memory. Proceedings of the National Academy of Sciences.

• Breyer M, Grüner J, Кlеіn A, Finke L, et al. (2023) In vitro characterization of cells derived from a patient with the GLA variant c.376A>G (p.S126G) highlights a non-pathogenic role in Fabry disease. Molecular Genetics and Metabolism Reports.

• Courtney CD, Sobieski C, Ramakrishnan C, Ingram RJ, et al. (2023) Optoα1AR activation in astrocytes modulates basal hippocampal synaptic excitation and inhibition in a stimulation‐specific manner. Hippocampus.

• Michalska JM, Lyudchik J, Velicky P, Štefaničková H, et al. (2023) Imaging brain tissue architecture across millimeter to nanometer scales. Nature Biotechnology.

• Boudkkazi S, Schwenk J, Nakaya N, Bréchet A, et al. (2023) A Noelin-organized extracellular network of proteins required for constitutive and context-dependent anchoring of AMPA-receptors. Neuron.

• Velicky P, Miguel E, Michalska JM, Lyudchik J, et al. (2023) Dense 4D nanoscale reconstruction of living brain tissue. Nature Methods.

• Guarina L, Le J, Griffith TN, Santana LF, et al. (2023) SanPy: A whole-cell electrophysiology analysis pipeline. bioRxiv [preprint].

• Buchholz MO, Guilabert AG, Ehret B, Schuhknecht GFP (2023) How synaptic strength, short-term plasticity, and input synchrony contribute to neuronal spike output. PLoS Computational Biology.

• Vyleta NP, Snyder JS (2023) Enhanced excitability but mature action potential waveforms at mossy fiber terminals of young, adult-born hippocampal neurons in mice. Communications Biology.

• Traunmüller L, Schulz JM, Ortiz R, Feng H, et al. (2023) A cell-type-specific alternative splicing regulator shapes synapse properties in a trans-synaptic manner. Cell Rep.

• Wang X, Zhang X, Zheng M, Xu L, et al. (2023) Noise-induced coexisting firing patterns in hybrid-synaptic interacting networks. Physica A Statistical Mechanics and its Applications.

• Yang Y, Booker SA, Clegg JM, Quintana‐Urzainqui I, et al. (2023) Identifying foetal forebrain interneurons as a target for monogenic autism risk factors and the polygenic 16p11.2 microdeletion. BMC Neuroscience.

• Bonnycastle K, Dobson KL, Blumrich E, Gajbhiye A, et al. (2023) Reversal of cell, circuit and seizure phenotypes in a mouse model of DNM1 epileptic encephalopathy. Nat Comm.

• Bershteyn M, Bröer S, Parekh M, Maury Y, et al. (2023) Human pallial MGE-type GABAergic interneuron cell therapy for chronic focal epilepsy. Cell stem cell.

2022

• Asiminas A, Booker SA, Dando O, Kozić Z, et al. (2022) Experience-dependent changes in hippocampal spatial activity and hippocampal circuit function are disrupted in a rat model of Fragile X Syndrome. Molecular Autism.

• Traunmüller L, Schulz JM, Ortiz R, Feng H, et al. (2022) Trans-cellular control of synapse properties by a cell type-specific splicing regulator. bioRxiv [preprint].

• Hüwel JD, Gresch A, Berns F, Koch R, et al. (2022) Tracing Patterns in Electrophysiological Time Series Data. 2022 IEEE 9th International Conference on Data Science and Advanced Analytics (DSAA).

• Hu M, Jiang X (2022) PatchView: A Python Package for Patch-clamp DataAnalysis and Visualization. The Journal of Open Source Software.

• Wang Y, Chiola S, Yang G, Russell C, et al. (2022) Modeling human telencephalic development and autism-associated SHANK3 deficiency using organoids generated from single neural rosettes. Nat Comm.

• Chowdhury A, Luchetti A, Fernandes G, Filho DA, et al. (2022) A locus coeruleus-dorsal CA1 dopaminergic circuit modulates memory linking. Neuron.

• de Oliveira LS, O’Leary H, Nawaz M, Loureiro R, et al. (2022) Enhanced hippocampal LTP but typical NMDA receptor and AMPA receptor function in a novel rat model of CDKL5 deficiency disorder. Research Square [preprint].

• Ben‐Simon Y, Kaefer K, Velicky P, Csicsvari J, et al. (2022) A direct excitatory projection from entorhinal layer 6b neurons to the hippocampus contributes to spatial coding and memory. Nat Comm.

• Ingram RJ, Leverton LK, Daniels V, Li J, et al. (2022) Increased GABA transmission to GnRH neurons after intrahippocampal kainic acid injection in mice is sex-specific and associated with estrous cycle disruption. Neurobiology of Disease.

• Anstey N, Kapgal V, Tiwari S, Watson TC, et al. (2022) Imbalance of flight–freeze responses and their cellular correlates in the Nlgn3−/y rat model of autism. Molecular Autism.

• Ladd A, Kim KG, Balewski J, Bouchard KE, et al. (2022) Scaling and Benchmarking an Evolutionary Algorithm for Constructing Biophysical Neuronal Models. Front Neuroinform.

• Hauser D, Behr K, Konno K, Schreiner D, et al. (2022) Targeted proteoform mapping uncovers specific Neurexin-3 variants required for dendritic inhibition. Neuron.

• Fleming W, Lee J, Briones BA, Bolkan SS, et al. (2022) Cholinergic interneurons mediate cocaine extinction in male mice through plasticity across medium spiny neuron subtypes. Cell Rep.

• Voss L, Bartos M, Elgueta C, Sauer J (2022) Interneuron function and cognitive behavior are preserved upon postnatal removal of Lhx6. Scientific Reports.

• Velicky P, Miguel E, Michalska JM, Wei D, et al. (2022) Saturated reconstruction of living brain tissue. bioRxiv [preprint].

• Balmer TS, Trussell LO (2022) Descending Axonal Projections from the Inferior Colliculus Target Nearly All Excitatory and Inhibitory Cell Types of the Dorsal Cochlear Nucleus. J Neurosci.

• Elmasri M, Hunter D, Winchester G, Bates EE, et al. (2022) Common synaptic phenotypes arising from diverse mutations in the human NMDA receptor subunit GluN2A. Communications Biology.

• Degro CE, Bolduan F, Vida I, Booker SA (2022) Interneuron diversity in the rat dentate gyrus: An unbiased in vitro classification. Hippocampus.

• Ben‐Simon Y, Kaefer K, Velicky P, Csicsvari J, et al. (2022) Entorhinal layer 6b subplate neurons govern spatial learning and memory. bioRxiv [preprint].

• Li S, Damonte VM, Chen C, Wang G, et al. (2022) Hyperexcitable arousal circuits drive sleep instability during aging. Science.

• Sabaté‐Soler S, Nickels S, Saraiva C, Berger E, et al. (2022) Microglia integration into human midbrain organoids leads to increased neuronal maturation and functionality. Glia.

2021

• Briones BA, Pitcher MN, Fleming W, Libby A, et al. (2021) Perineuronal Nets in the Dorsomedial Striatum Contribute to Behavioral Dysfunction in Mouse Models of Excessive Repetitive Behavior. Biological Psychiatry Global Open Science.

• Sanjel B, Kim B, Song M, Carstens E, et al. (2021) Glucosylsphingosine evokes pruritus via activation of 5‐HT2A receptor and TRPV4 in sensory neurons. British Journal of Pharmacology.

• Chang C, Evans MD, Yu X, Yu G, et al. (2021) Tau reduction affects excitatory and inhibitory neurons differently, reduces excitation/inhibition ratios, and counteracts network hypersynchrony. Cell Rep.

• Blockus H, Rolotti SV, Szoboszlay M, Pezé-Heidsieck E, et al. (2021) Synaptogenic activity of the axon guidance molecule Robo2 underlies hippocampal circuit function. Cell Rep.

• Lodge M, Hernandez M, Schulz JM, Bischofberger J (2021) Sparsification of AP firing in adult-born hippocampal granule cells via voltage-dependent α5-GABAA receptors. Cell Rep.

• Scheuer T, Brinke EAD, Grosser S, Wolf SA, et al. (2021) Reduction of cortical parvalbumin-expressing GABAergic interneurons in a rodent hyperoxia model of preterm birth brain injury with deficits in social behavior and cognition. Development.

• Kim YG, Shin JJ, Kim SJ (2021) Minhee Analysis Package: an integrated software package for detection and management of spontaneous synaptic events. Molecular Brain.

• Fleming W, Lee J, Briones BA, Bolkan SS, et al. (2021) Cholinergic interneurons mediate cocaine extinction through similar plasticity across medium spiny neuron subtypes. bioRxiv [preprint].

• Kim S, Guzman SJ, Jo DH, Cho CS, et al. (2021) Giant Y79 retinoblastoma cells contain functionally active T-type calcium channels. Pflügers Archiv - European Journal of Physiology.

• Rupprecht P, Carta S, Hoffmann A, Echizen M, et al. (2021) A database and deep learning toolbox for noise-optimized, generalized spike inference from calcium imaging. Nature Neuroscience.

• Booker SA, Sumera A, Kind PC, Wyllie DJA (2021) Contribution of NMDA Receptors to Synaptic Function in Rat Hippocampal Interneurons. eNeuro.

• Vandael D, Okamoto Y, Jónás P (2021) Transsynaptic modulation of presynaptic short-term plasticity in hippocampal mossy fiber synapses. Nat Comm.

• Vandael D, Okamoto Y, Borges-Merjane C, Vargas‐Barroso V, et al. (2021) Subcellular patch-clamp techniques for single-bouton stimulation and simultaneous pre- and postsynaptic recording at cortical synapses. Nature Protocols.

• Zhang X, Schlögl A, Vandael D, Jónás P (2021) MOD: A novel machine-learning optimal-filtering method for accurate and efficient detection of subthreshold synaptic events in vivo. J Neurosci Methods.

• de Oliveira LS, Sumera A, Booker SA (2021) Repeated whole-cell patch-clamp recording from CA1 pyramidal cells in rodent hippocampal slices followed by axon initial segment labeling. STAR Protocols.

• Wang Y, Chiola S, Yang G, Russell C, et al. (2021) Modeling autism-associated SHANK3 deficiency using human cortico-striatal organoids generated from single neural rosettes. bioRxiv [preprint].

• Zoupi L, Booker SA, Eigel D, Werner C, et al. (2021) Selective vulnerability of inhibitory networks in multiple sclerosis. Acta Neuropathologica.

• Holler S, Köstinger G, Martin KA, Schuhknecht GFP, et al. (2021) Structure and function of a neocortical synapse. Nature.

• Courtney CD, Sobieski C, Ramakrishnan C, Ingram RJ, et al. (2021) Evaluating the efficacy of Optoα1AR activation in astrocytes in modulating basal hippocampal synaptic excitation and inhibition. bioRxiv [preprint].

• Sammons RP, Tzilivaki A, Schmitz D (2021) OUP accepted manuscript. Cerebral Cortex.

• Chowdhury A, Luchetti A, Fernandes G, Filho DA, et al. (2021) A Locus Coeruleus- Dorsal CA1 Dopaminergic Circuit Modulates Memory Linking. SSRN Electronic Journal.

2020

• McCabe MP, Shore AN, Frankel WN, Weston MC (2020) Altered Fast Synaptic Transmission in a Mouse Model of DNM1-Associated Developmental Epileptic Encephalopathy. eNeuro.

• Sammons RP, Tzilivaki A, Schmitz D (2020) Local microcircuitry of parasubiculum shows distinct and common features of excitatory and inhibitory connectivity. bioRxiv [preprint].

• Yasuda H, Yamamoto H, Hanamura K, Mehruba M, et al. (2020) PKN1 promotes synapse maturation by inhibiting mGluR-dependent silencing through neuronal glutamate transporter activation. Communications Biology.

• Vandael D, Okamoto Y, Jónás P (2020) Transsynaptic modulation of presynaptic short-term plasticity induction in hippocampal mossy fiber synapses. bioRxiv [preprint].

• Zoupi L, Booker SA, Eigel D, Werner C, et al. (2020) Demyelination induces selective vulnerability of inhibitory networks in multiple sclerosis. bioRxiv [preprint].

• Rupprecht P, Carta S, Hoffmann A, Echizen M, et al. (2020) Database and deep learning toolbox for noise-optimized, generalized spike inference from calcium imaging. bioRxiv [preprint].

• Anstey N, Kapgal V, Tiwari S, Watson TC, et al. (2020) Imbalance of flight-freeze responses and their cellular correlates in the Nlgn3 -/y rat model of autism. bioRxiv [preprint].

• Zhang X, Schlögl A, Jónás P (2020) Selective Routing of Spatial Information Flow from Input to Output in Hippocampal Granule Cells. Neuron.

• Booker SA, de Oliveira LS, Anstey N, Kozić Z, et al. (2020) Input-Output Relationship of CA1 Pyramidal Neurons Reveals Intact Homeostatic Mechanisms in a Mouse Model of Fragile X Syndrome. Cell Rep.

• Lodge M, Hernandez M, Schulz JM, Bischofberger J (2020) Sparsification of AP firing in adult-born hippocampal granule cells via voltage-dependent α5-GABA A receptors. bioRxiv [preprint].

• Rajaram E, Pagella S, Grothe B, Kopp‐Scheinpflug C (2020) Physiological and anatomical development of glycinergic inhibition in the mouse superior paraolivary nucleus following hearing onset. Journal of Neurophysiology.

• Vandael D, Borges-Merjane C, Zhang X, Jónás P (2020) Short-Term Plasticity at Hippocampal Mossy Fiber Synapses Is Induced by Natural Activity Patterns and Associated with Vesicle Pool Engram Formation. Neuron.

• Roth FC, Hu H (2020) An axon-specific expression of HCN channels catalyzes fast action potential signaling in GABAergic interneurons. Nat Comm.

• Brebner LS, Ziminski JJ, Margetts‐Smith G, Sieburg MC, et al. (2020) Extinction of cue‐evoked food‐seeking recruits a GABAergic interneuron ensemble in the dorsal medial prefrontal cortex of mice. Eur J Neurosci.

• Eguchi K, Velicky P, Hollergschwandtner E, Itakura M, et al. (2020) Advantages of Acute Brain Slices Prepared at Physiological Temperature in the Characterization of Synaptic Functions. Front Cell Neurosci.

• Booker SA, Harada H, Elgueta C, Bank J, et al. (2020) Presynaptic GABAB receptors functionally uncouple somatostatin interneurons from the active hippocampal network. eLife.

• Borges-Merjane C, Kim O, Jónás P (2020) Functional Electron Microscopy, “Flash and Freeze,” of Identified Cortical Synapses in Acute Brain Slices. Neuron.

2019

• Luck R, Urban S, Karakatsani A, Harde E, et al. (2019) VEGF/VEGFR2 signaling regulates hippocampal axon branching during development. eLife.

• Peng Y, Mittermaier FX, Planert H, Schneider UC, et al. (2019) High-throughput microcircuit analysis of individual human brains through next-generation multineuron patch-clamp. eLife.

• Eguchi K, Velicky P, Hollergschwandtner E, Itakura M, et al. (2019) Advantages of acute brain slices prepared at physiological temperature in characterization of synaptic functions. bioRxiv [preprint].

• Brebner LS, Ziminski JJ, Margetts‐Smith G, Sieburg MC, et al. (2019) The Emergence of a Stable Neuronal Ensemble from a Wider Pool of Activated Neurons in the Dorsal Medial Prefrontal Cortex during Appetitive Learning in Mice. J Neurosci.

• Blockus H, Rolotti SV, Szoboszlay M, Ming T, et al. (2019) Synaptogenic activity of the axon guidance molecule Robo2 is critical for hippocampal circuit function. bioRxiv [preprint].

• Sieburg MC, Ziminski JJ, Margetts‐Smith G, Reeve HM, et al. (2019) Reward Devaluation Attenuates Cue-Evoked Sucrose Seeking and Is Associated with the Elimination of Excitability Differences between Ensemble and Non-ensemble Neurons in the Nucleus Accumbens. eNeuro.

• Booker SA, Domanski AP, Dando O, Jackson AD, et al. (2019) Altered dendritic spine function and integration in a mouse model of fragile X syndrome. Nat Comm.

• Haq N, Schmidt‐Hieber C, Sialana FJ, Ciani L, et al. (2019) Loss of Bardet-Biedl syndrome proteins causes synaptic aberrations in principal neurons. PLoS Biology.

• Rajaram E, Kaltenbach C, Fischl MJ, Mrowka L, et al. (2019) Slow NMDA-Mediated Excitation Accelerates Offset-Response Latencies Generated via a Post-Inhibitory Rebound Mechanism. eNeuro.

• Schulz JM, Knoflach F, Hernandez M, Bischofberger J (2019) Enhanced Dendritic Inhibition and Impaired NMDAR Activation in a Mouse Model of Down Syndrome. J Neurosci.

• Rojas PA, Plath JA, Gestrich J, Ananthasubramaniam B, et al. (2019) Beyond spikes: Multiscale computational analysis ofin vivolong-term recordings in the cockroach circadian clock. Network Neuroscience.

2018

• Espinoza C, Guzman SJ, Zhang X, Jónás P (2018) Parvalbumin+ interneurons obey unique connectivity rules and establish a powerful lateral-inhibition microcircuit in dentate gyrus. Nat Comm.

• Rifkin R, Huyghe D, Li X, Parakala ML, et al. (2018) GIRK currents in VTA dopamine neurons control the sensitivity of mice to cocaine-induced locomotor sensitization. Proceedings of the National Academy of Sciences.

• Schulz JM, Knoflach F, Hernandez M, Bischofberger J (2018) Dendrite-targeting interneurons control synaptic NMDA-receptor activation via nonlinear α5-GABAA receptors. Nat Comm.

• Parras A, Anta H, Santos‐Galindo M, Swarup V, et al. (2018) Autism-like phenotype and risk gene mRNA deadenylation by CPEB4 mis-splicing. Nature.

• Luis COS, Sánchez-García MA, Nieto-González JL, García‐Junco‐Clemente P, et al. (2018) Substantia nigra dopaminergic neurons and striatal interneurons are engaged in three parallel but interdependent postnatal neurotrophic circuits. Aging Cell.

• Grimm C, Silapētere A, Vogt A, Sierra YAB, et al. (2018) Electrical properties, substrate specificity and optogenetic potential of the engineered light-driven sodium pump eKR2. Scientific Reports.

• Scheib U, Broser M, Constantin OM, Yang SF, et al. (2018) Rhodopsin-cyclases for photocontrol of cGMP/cAMP and 2.3 Å structure of the adenylyl cyclase domain. Nat Comm.

• Rothman JS, Silver RA (2018) NeuroMatic: An Integrated Open-Source Software Toolkit for Acquisition, Analysis and Simulation of Electrophysiological Data. Front Neuroinform.

• Hu H, Roth FC, Vandael D, Jónás P (2018) Complementary Tuning of Na+ and K+ Channel Gating Underlies Fast and Energy-Efficient Action Potentials in GABAergic Interneuron Axons. Neuron.

• Kim S, Kim Y, Lee S, Ho W (2018) Dendritic spikes in hippocampal granule cells are necessary for long-term potentiation at the perforant path synapse. eLife.

• Marshall J, Xu J, Contractor A (2018) Kainate Receptors Inhibit Glutamate Release Via Mobilization of Endocannabinoids in Striatal Direct Pathway Spiny Projection Neurons. J Neurosci.

• Turko P, Groberman K, Browa F, Cobb S, et al. (2018) Differential Dependence of GABAergic and Glutamatergic Neurons on Glia for the Establishment of Synaptic Transmission. Cerebral Cortex.

2017

• Chen C, Satterfield R, Young SM Jr, Jonas P (2017). Triple Function of Synaptotagmin 7 Ensures Efficiency of High-Frequency Transmission at Central GABAergic Synapses. Cell Rep 21:2082-2089.

• Christiansen GB Andersen KH, Riis S, Nykjaer A, Bolcho U, Jensen MS, Holm MM (2017). The sorting receptor SorCS3 is a stronger regulator of glutamate receptor functions compared to GABAergic mechanisms in the hippocampus. Hippocampus 27:235-248.

• Li L, Sultan S, Heigele S, Schmidt-Salzmann C, Toni N, Bischofberger J (2017) Silent synapses generate sparse and orthogonal action potential firing in adult-born hippocampal granule cells. eLife 2017;6:e23612

• Schmidt-Hieber C, Toleikyte G, Aitchison L, Roth A, Clark BA, Branco T, Häusser M (2017). Active dendritic integration as a mechanism for robust and precise grid cell firing. Nat Neurosci 8:1114-1121

• Rueckl M, Lenzi SC, Moreno-Velasquez L, Parthier D, Schmitz D, Ruediger S, Johenning FW (2017). SamuROI, a Python-Based Software Tool for Visualization and Analysis of Dynamic Time Series Imaging at Multiple Spatial Scales. Front Neuroinform doi: 10.3389/fninf.2017.00044

• Saras A, Wu VV, Brawer HJ, Tanouye MA (2017). Investigation of Seizure-Susceptibility in a Drosophila melanogaster Model of Human Epilepsy with Optogenetic Stimulation. Genetics 206:1739-1746

• Batsikadze G, Paulus W, Hasan A, Grundey J, Kuo MF, Nitsche MA (2017). Compromised neuroplasticity in cigarette smokers under nicotine withdrawal is restituted by the nicotinic α4β2-receptor partial agonist varenicline. Sci Rep 7:1387

• Booker SA, Campbell GR, Mysiak KS, Brophy PJ, Kind PC, Mahad DJ, Wyllie DJ (2017). Loss of protohaem IX farnesyltransferase in mature dentate granule cells impairs short-term facilitation at mossy fibre to CA3 pyramidal cell synapses. J Physiol 195:2147-2160.

• Akbalik G, Langebeck-Jensen K, Tushev G, Sambandan S, Rinne J, Epstein I, Cajigas 1, Vlatkovic I, Schuman EM (2017). Visualization of newly synthesized neuronal RNA in vitro and in vivo using click-chemistry. RNA Biol. 14:20-28.

• Cross KP, Britton S, Mangulins R, Money TG, Robertson RM (2017). Food deprivation and prior anoxic coma have opposite effects on the activity of a visual interneuron in the locust. J Inset Physiol 98:336-346.

• Gan J, Weng SM, Pernía-Andrade AJ, Csicsvari J, Jonas P (2017). Phase-Locked Inhibition, but Not Excitation, Underlies Hippocampal Ripple Oscillations in Awake Mice In Vivo. Neuron 10.1016/j.neuron.2016.12.018

• Sinclair JL, Fischl MJ, Alexandrova O, Heβ M, Grothe B, Leibold C, Kopp-Scheinpflug C (2017). Sound-Evoked Activity Influences Myelination of Brainstem Axons in the Trapezoid Body. J Neurosci 37 (34) 8239-8255.

• Sambandan S, Akbalik G, Kochen L, Rinne J, Kahlstatt J, Glock C, Tushev G, Alvarez-Castelao B, Heckel A, Schuman EM (2017). Activity-dependent spatially localized miRNA maturation in neuronal dendrites. Science, Feb 10; 355:634-637.

• Sinclair JL, Barnes-Davies M, Kopp-Scheinpflug C, Forsythe ID (2017). Strain-specific differences in the development of neuronal excitability in the mouse ventral nucleus of the trapezoid body. Hear Res 18:28-37.

2016

• Vyleta NP, Borges-Merjane C, Jonas P (2016) Plasticity-dependent, full detonation at hippocampal mossy fiber–CA3 pyramidal neuron synapses. eLife 2016;5:e17977.

• Brunner J, Szabadics J (2016) Analogue modulation of back-propagating action potentials enables dendritic hybrid signalling. Nat Comm Oct 5;7:13033.

• Hanus C, Geptin H, Tushev G, Garg S, Alvarez-Castelao B, Sambandan S, Kochen L, Hafner AS, Langer JD, Schuman EM (2016) Unconventional secretory processing diversifies neuronal ion channel properties. eLife 2016;5:e20609.

• Engel D (2016) Subcellular Patch-clamp Recordings from the Somatodendritic Domain of Nigral Dopamine Neurons. J Vis Exp doi: 10.3791/54601

• Guzman SJ, Schlögl A, Frotscher M, Jonas P (2016) Synaptic mechanisms of pattern completion in the hippocampal CA3 network. Science, Sep 9; 353:1117-23.

• Iijima Y, Behr K, Iijima T, Biemans B, Bischofberger J, Scheiffele P (2016) Distinct Defects in Synaptic Differentiation of Neocortical Neurons in Response to Prenatal Valproate Exposure. Sci Rep 6:27400.

• Janz P, Savanthrapadian S, Haussler U, Kilias A, Nestel S, Kretz O, Kirsch M, Bartos M, Egert U, Haas CA (2016) Synaptic Remodeling of Entorhinal Input Contributes to an Aberrant Hippocampal Network in Temporal Lobe Epilepsy. Cerebral Cortex bhw093.

• Money TG, Sproule MK, Cross KP, Robertson RM (2016) Octopamine stabilizes conduction reliability of an unmyelinated axon during hypoxic stress. J Neurophysiol jn-00354.

• Cross KP, Robertson RM (2016) Ionic mechanisms maintaining action potential conduction velocity at high firing frequencies in an unmyelinated axon. Physiol Reports 4(10):e12814.

• Mishra RK, Kim S, Guzman SJ, Jonas P (2016) Symmetric spike timing-dependent plasticity at CA3-CA3 synapses optimizes storage and recall in autoassociative networks. Nat Comm May 13;7:11552.

• Merel J, Shababo B, Naka A, Adesnik H, Paninski L (2016) Bayesian methods for event analysis of intracellular currents. J Neurosci Methods 269:21-32.

• Booker SA, Althof D, Gross A, Loreth D, Müller J, Unger A, Fakler B, Varrao A, Watanabe M, Gassmann M, Bettler B, Shigemoto R, Vida I, Kulik A (2016) KCTD12 Auxiliary Proteins Modulate Kinetics of GABAB Receptor-Mediated Inhibition in Cholecystokinin-Containing Interneurons. Cereb Cortex pii:bhw090

• Heigele S, Sultan S, Toni N, Bischofberger J (2016) Bidirectional GABAergic control of action potential firing in newborn hippocampal granule cells. Nat Neurosci 19, 263-270.

2015

• Kroll JR, Wong KG, Siddiqui FM, Tanouye MA (2015). Disruption of Endocytosis with the Dynamin Mutant shibirets1 Suppresses Seizures in Drosophila. Genetics 201:1087-1102.

• Sultan S, Li L, Moss J, Petrelli F, Casse F, Gebara E, Lopatar J, Pfrieger FW, Bezzi P, Bischofberger J, Toni N (2015) Synaptic Integration of Adult-Born Hippocampal Neurons Is Locally Controlled by Astrocytes. Neuron 88(5):957-72.

• Kowalski J, Gan J, Jonas P, Pernía-Andrade AJ (2015) Intrinsic membrane properties determine hippocampal differential firing pattern in vivo in anesthetized rats. Hippocampus doi: 10.1002/hipo.22550.

• Scheib U, Stehest K, Gee CE, Körschen HG, Fudim R, Oertner TG, Hegemann P (2015) The rhodopsin-guanylyl cyclase of the aquatic fungus Blastocladiella emersonii enables fast optical control of cGMP signaling. Sci Signal 2015 Aug 11;8(389):rs8. doi: 10.1126/scisignal.aab0611.

• Booker SA, Pires N, Cobb S, Soares-da-Silva P, Vida I (2015) Carbamazepine and oxcarbazepine, but not eslicarbazepine, enhance excitatory synaptic transmission onto hippocampal CA1 pyramidal cells through an antagonist action at adenosine A1 receptors. Neuropharmacology 93:103-15

• Chan V, Neal DM, Uzel SGM, Kim H, Bashir R, Asada HH (2015) Fabrication and characterization of optogenetic, multi-strip cardiac muscles. Lab Chip 15: 2258-2268

• Oettinghaus B, Schulz JM, Restelli LM, et al. (2015) Synaptic dysfunction, memory deficits and hippocampal atrophy due to ablation of mitochondrial fission in adult forebrain neurons. Cell Death Diff doi: 10.1038/cdd.2015.39

• Franzoni E, Booker SA, Parthasarathy S, et al. (2015) miR-128 regulates neuronal migration, outgrowth and intrinsic excitability via the intellectual disability gene Phf6. Polleux F, ed. eLife 2015:4;e04263.

• Degro CE, Kulik A, Booker SA, Vida I (2015) Compartmental distribution of GABAB receptor-mediated currents along the somatodendritic axis of hippocampal principal cells. Front Synaptic Neurosci 7:6.

• Hönigsperger C, Marosi M, Murphy R, Storm JF (2015) Dorsoventral differences in Kv7/M-current and its impact on resonance, temporal summation and excitability in rat hippocampal pyramidal cells. J Physiol 593(7): 1551-1580.

• You X, Vlatkovic I, Babic A, et al. (2015) Neural circular RNAs are derived from synaptic genes and regulated by development and plasticity. Nat Neurosci doi:10.1038/nn.3975.

• Strüber M, Jonas P, Bartos M (2015) Strength and duration of perisomatic GABAergic inhibition depend on distance between synaptically connected cells. PNAS 112:1220-5

2014 and older

• Booker SA, Song J, Vida I (2014) Whole-cell Patch-clamp Recordings from Morphologically- and Neurochemically-identified Hippocampal Interneurons. J Vis Exp (91), e51706, doi:10.3791/51706

• Kim S (2014) Action Potential Modulation in CA1 Pyramidal Neuron Axons Facilitates OLM Interneuron Activation in Recurrent Inhibitory Microcircuits of Rat Hippocampus. PLoS One 9:e113124.

• Guzman SJ, Schlögl A, Schmidt-Hieber C (2014) Stimfit: quantifying electrophysiological data with Python. Front Neuroinform doi: 10.3389/fninf.2014.00016

• Savanthrapadian S, Meyer T, Elgueta C, Booker SA, Vida I, Bartos M (2014) Synaptic properties of SOM- and CCK-expressing cells in dentate gyrus interneuron networks. J Neurosci 24:8197-8209.

• Boudkkazi S, Brechet A, Schwenk J and Fakler B (2014). Cornichon2 dictates the time course of excitatory transmission at individual hippocampal synapes. Neuron, doi: http://dx.doi.org/10.1016/j.neuron.2014.03.031

• Hu H and Jonas P (2014). A supercritical density of Na+ channels ensures fast signaling in GABAergic interneuron axons. Nat Neurosci, doi:10.1038/nn.3678

• Vyleta NP and Jonas P (2014). Loose coupling between Ca2+ channels and release sensors at a plastic hippocampal synapse. Science, Feb 7; 343:665-70.

• Schmidt-Salzmann C, Li L, Bischofberger J (2013). Functional properties of extrasynaptic AMPA and NMDA receptors during postnatal hippocampal neurogenesis. J Physiol, doi: 10.1113/jphysiol.2013.267203

• Hosp JA, Strüber M, Yanagawa Y, Obata K, Vida I, Jonas P, Bartos M (2013). Morpho-physiological criteria divide dentate gyrus interneurons into classes. Hippocampus, doi: 10.1002/hipo.22214

• Schlögl A, Jonas P, Schmidt-Hieber C, Guzman SJ (2013). Stimfit: a fast visualization and analysis environment for cellular neurophysiology. Biomedical Engineering/Biomedizinische Technik.

• Rodriguez-Sierra OE, Turesson HK, Pare D (2013). Contrasting distribution of physiological cell types in different regions of the bed nucleus of the stria terminalis. J Neurophysiol August 7, 2013, doi: 10.1152/jn.00408.2013

• Booker SA, Gross A, Althof D, Shigemoto R, Bettler B, Frotscher M, Hearing M, Wickman K, Watanabe M, Kulik A, Vida I (2013). Differential GABAB-receptor-mediated effects in perisomatic- and dendrite-targeting parvalbumin interneurons. J Neurosci 33:7961-7974.

• Turesson HK, Rodriguez-Sierra OE, Pare D (2013). Intrinsic connections in the anterior part of the bed nucleus of the stria terminalis. J Neurophysiol February 27, 2013, doi: 10.1152/jn.00004.2013

• Schmidt-Hieber C, Häusser M (2013). Cellular mechanisms of spatial navigation in the medial entorhinal cortex. Nat Neurosci 16(3):325-331.

• Fuzik J, Gellért L, Oláh G, Herédi J, Kocsis K, Knapp L, Nagy D, Kincses ZT, Kis Z, Farkas T, Toldi J (2013). Fundamental interstrain differences in cortical activity between Wistar and Sprague-Dawley rats during global ischemia. Neuroscience 228:371-381.

• McLeod F, Ganley R, Williams L, Selfridge J, Bird A, Cobb SR (2013). Reduced seizure threshold and altered network oscillatory properties in a mouse model of Rett syndrome. Neuroscience 231:195-205.

• Ho EC, Strüber M, Bartos M, Zhang L, Skinner FK (2012). Inhibitory Networks of Fast-Spiking Interneurons Generate Slow Population Activities due to Excitatory Fluctuations and Network Multistability. J Neurosci 29:9931-9946.

• Kim S, Guzman SJ, Hu H, Jonas P (2012). Active dendrites support efficient initiation of dendritic spikes in hippocampal CA3 pyramidal neurons. Nat Neurosci 15(4):600-606.

• Eggermann E and Jonas P (2012). How the ‘slow’ Ca²⁺ buffer parvalbumin affects transmitter release in nanodomains-coupling regimes. Nat Neurosci 15(1):2022.

• Sauer JF, Strüber M, Bartos M (2012) Interneurons provide circuit-specific depolarization and hyperpolarization. J Neurosci 32(12):4224-4229.

• Poh YC, Beyder A, Strege PR, Farrugia G, Buist ML (2011). Quantification of gastrointestinal sodium channelopathy. J Theor Biol 293:41-48.

• Sambandan S, Sauer JF, Vida I, Bartos M (2010). Associative plasticity at excitatory synapses facilitates recruitment of fast-spiking interneurons in the dentate gyrus. J Neurosci 30:11826-11837.

• Pelkonen A, Hiltunen M, Kiianmaa K, Yavich L (2010). Stimulated dopamine overflow and alpha-synuclein expression in the nucleus accumbens core distinguish rats bred for differential ethanol preference. J Neurochem 114:1168-1176.

• Schmidt-Hieber C, Bischofberger J (2010). Fast sodium channel gating supports localized and efficient axonal action potential initiation. J Neurosci 30(30):10233-10242.

• Guzman SJ, Schmidt H, Franke H, Krügel U, Eilers J, Illes P, Gerevich Z (2010). P2Y₁ receptors inhibit long-term depression in the prefrontal cortex. Neuropharmacology 59(6):406-415.

• Seutin V, Engel D (2010) Differences in Na⁺ Conductance Density and Na⁺ Channel Functional Properties Between Dopamine and GABA Neurons of the Rat Substantia Nigra. J Neurophysiol 103:3099-3114.

• Kowalski J, Geuting M, Paul S, Dieni S, Laurens J, Zhao S, Drakew A, Haas CA, Frotscher M, Vida I (2010). Proper Layering Is Important for Precisely Timed Activation of Hippocampal Mossy Cells. Cereb Cortex. 20(9):2043-2054.

• Sauer JF, Bartos M (2010). Recruitment of early postnatal parvalbumin-positive hippocampal interneurons by GABAergic excitation. J Neurosci. 30(1):110-5.

• Babu H, Ramirez-Rodriguez, Fabel K, Bischofberger J, Kempermann G (2009). Synaptic network activity induces neuronal differentiation of adult hippocampal precursor cells through BDNF signaling. Front. Neurogenesis 30:3-49.

• Doischer D, Hosp JA, Yanagawa Y, Obata K, Jonas P, Vida I, Bartos M (2008). Postnatal differentiation of basket cells from slow to fast signaling devices. J Neurosci. 28(48):12956-68.

• Stocca G, Schmidt-Hieber C, Bischofberger J (2008). Differential dendritic Ca²⁺ signalling in young and mature hippocampal granule cells. J Physiol. 586(16):3795-811.

• Schmidt-Hieber C, Jonas P, Bischofberger J (2008). Action potential initiation and propagation in hippocampal mossy fibre axons. J Physiol. 586(7):1849-57.

• Li L, Bischofberger J, Jonas P (2007). Differential gating and recruitment of P/Q-, N-, and R-type Ca²⁺ channels in hippocampal mossy fiber boutons. J Neurosci. 27(49):13420-9.

• Schmidt-Hieber C, Jonas P, Bischofberger J (2007). Subthreshold dendritic signal processing and coincidence detection in dentate gyrus granule cells. J Neurosci. 27(31):8430-41.

• Hefft S, Jonas P (2005). Asynchronous GABA release generates long-lasting inhibition at a hippocampal interneuron-principal neuron synapse. Nat Neurosci. 8(10):1319-28.

• Schmidt-Hieber C, Jonas P, Bischofberger J (2004). Enhanced synaptic plasticity in newly generated granule cells of the adult hippocampus. Nature. 2004 May 13;429(6988):184-7.